Installation

You must use conda environment : https://docs.conda.io/en/latest/index.html

Users

Create a new environment with plantscan3d installed in there

mamba create -n plantscan3d -c openalea3 -c conda-forge  openalea.plantscan3d
mamba activate plantscan3d

Install plantscan3d in a existing environment

mamba install -c openalea3 -c conda-forge openalea.plantscan3d

(Optional) Test your installation

mamba install -c conda-forge pytest
git clone https://github.com/openalea/plantscan3d.git
cd plantscan3d/test; pytest

Developers

Install From source

# Install dependency with conda
mamba env create -f conda/environment.yml
mamba activate plantscan3d_dev

# Clone plantscan3d and install
git clone https://github.com/openalea/plantscan3d.git
cd plantscan3d
pip install .

# (Optional) Test your installation
cd test; pytest